SMMP

swMATH882MaRDI QIDQ13626FDOQ13626

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Described by source

• SMMP v. 3.0-simulating proteins and protein interactions in Python and Fortran

Cited In (11)

• New algorithms and the physics of proteins
• Generalized ensemble techniques and protein folding simulations
• CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins
• An enhanced version of SMMP-open-source software package for simulation of proteins
• Application of biased Metropolis algorithms: from protons to proteins
• [SMMP] A modern package for simulation of proteins
• Molecular Dynamics Approach to Relaxation and Aggregation of Polymer Chains
• A COMBINATION OF REPLICA EXCHANGE MONTE CARLO AND ENERGY LANDSCAPE PAVING ALGORITHMS TO INCREASE THE EFFECTIVENESS OF CONFORMATIONAL SAMPLING
• A unified \(O(\log N)\) and optimal sorting vector algorithm
• Application of Wang-Landau sampling to a protein model using SMMP
• ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations

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