Discretization orders for protein side chains

DOI10.1007/S10898-013-0135-1zbMATH Open1312.90069DBLPjournals/jgo/CostaMLCCM14OpenAlexW2070122352WikidataQ62562146 ScholiaQ62562146MaRDI QIDQ486406FDOQ486406

Authors: Virginia Costa, Antonio Mucherino, Andrea Cassioli, Carlile Lavor, Luiz Mariano Carvalho, Nelson Maculan 

Publication date: 15 January 2015

Published in: Journal of Global Optimization (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10898-013-0135-1

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zbMATH Keywords

combinatorial optimizationdistance geometryproteinsdiscretization ordersbranch-and-prune

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Combinatorial optimization (90C27)

Cites Work

• Euclidean Distance Geometry and Applications
• Title not available (Why is that?)
• Distance Geometry
• Molecular modeling and simulation. An interdisciplinary guide
• Hyperbolic smoothing and penalty techniques applied to molecular structure determination
• The discretizable molecular distance geometry problem
• The interval branch-and-prune algorithm for the discretizable molecular distance geometry problem with inexact distances
• Discretization orders for distance geometry problems
• Molecular distance geometry methods: from continuous to discrete
• Experimental algorithms. 10th international symposium, SEA 2011, Kolimpari, Chania, Crete, Greece, May 5--7, 2011. Proceedings

Cited In (11)

• On the estimation of unknown distances for a class of Euclidean distance matrix completion problems with interval data
• Recent results on assigned and unassigned distance geometry with applications to protein molecules and nanostructures
• On the polynomiality of finding \(^K\text{DMDGP}\) re-orders
• Recent advances on the interval distance geometry problem
• Minimal NMR distance information for rigidity of protein graphs
• Optimal partial discretization orders for discretizable distance geometry
• On the definition of artificial backbones for the discretizable molecular distance geometry problem
• Optimal Discretization Orders for Distance Geometry: A Theoretical Standpoint
• Assigned and unassigned distance geometry: applications to biological molecules and nanostructures
• Clifford algebra and the discretizable molecular distance geometry problem
• Tuning interval branch-and-prune for protein structure determination

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