Probabilistic interpretation and random walk on spheres algorithms for the Poisson-Boltzmann equation in molecular dynamics
DOI10.1051/M2AN/2010050zbMATH Open1204.82020OpenAlexW2112417612MaRDI QIDQ4933352FDOQ4933352
Authors: Mireille Bossy, Nicolas Champagnat, Sylvain Maire, Denis Talay 
Publication date: 12 October 2010
Published in: ESAIM: Mathematical Modelling and Numerical Analysis (Search for Journal in Brave)
Full work available at URL: https://eudml.org/doc/44670
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Monte Carlo methods (65C05) Biochemistry, molecular biology (92C40) Diffusion processes (60J60) Probabilistic models, generic numerical methods in probability and statistics (65C20) Random walks, random surfaces, lattice animals, etc. in equilibrium statistical mechanics (82B41) PDEs in connection with optics and electromagnetic theory (35Q60)
Cites Work
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Cited In (21)
- Stochastic finite differences for elliptic diffusion equations in stratified domains
- Analytic Expressions of the Solutions of Advection-Diffusion Problems in One Dimension with Discontinuous Coefficients
- Monte Carlo methods for linear and non-linear Poisson-Boltzmann equation
- A Monte Carlo estimation of the mean residence time in cells surrounded by thin layers
- Probabilistic interpretation for the nonlinear Poisson-Boltzmann equation in molecular dynamics
- Analysis and comparison of Green's function first-passage algorithms with ``Walk on spheres algorithms.
- Title not available (Why is that?)
- Simulating diffusion processes in discontinuous media: benchmark tests
- On dynamical systems perturbed by a null-recurrent motion: the general case
- A transformed stochastic Euler scheme for multidimensional transmission PDE
- Lagrangian stochastic models with specular boundary condition
- On probabilistic analytical and numerical approaches for divergence form operators with discontinuous coefficients
- An exponential timestepping algorithm for diffusion with discontinuous coefficients
- Convergence rate of Euler scheme for time-inhomogeneous SDEs involving the local time of the unknown process
- A general framework to simulate diffusions with discontinuous coefficients and local times
- Two consistent estimators for the skew Brownian motion
- Simulating diffusion processes in discontinuous media: a numerical scheme with constant time steps
- Simulating diffusions with piecewise constant coefficients using a kinetic approximation
- Linking the Monte Carlo radiative transfer algorithm to the radiative transfer equation
- A stochastic solver of the generalized Born model
- A partially reflecting random walk on spheres algorithm for electrical impedance tomography
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