scientific article; zbMATH DE number 1445329

MaRDI QIDQ4952646zbMATH OpenFDO

Authors J. Kevin Lanctot, Enhui Yang, Ming Li

Publication date 10 May 2000

zbMATH Keywords

algorithmDNA sequencesentropy estimatorgrammar transform analysis and compressionGTAC

Mathematics Subject Classification ID

Software, source code, etc. for problems pertaining to biology (92-04) Computational methods for problems pertaining to biology (92-08) Protein sequences, DNA sequences (92D20)

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Cited in

(11)

• Application of Lempel-Ziv factorization to the approximation of grammar-based compression.
• Linear-time text compression by longest-first substitution
• The smallest grammar problem as constituents choice and minimal grammar parsing
• On the complexity of the smallest grammar problem over fixed alphabets
• Rényi continuous entropy of DNA sequences
• A maximum entropy principle for the distribution of local complexity in naturally occurring nucleotide sequences
• Textual data compression in computational biology: algorithmic techniques
• scientific article; zbMATH DE number 910859 (Why is no real title available?)
• The Minimum Entropy Mapping Spectrum of a DNA Sequence
• scientific article; zbMATH DE number 6746646 (Why is no real title available?)
• Entropy analysis of the DNA code dynamics in human chromosomes

Describes a project that uses

Uses Software

• CDNA

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