Topological data analysis for self-organization of biological tissues

DOI10.1007/978-3-319-59108-7_18MaRDI QIDQ5077679zbMATH OpenOpenAlexFDO

Authors

Publication date 18 May 2022

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-319-59108-7_18

zbMATH Keywords

persistent homologybottleneck distancepersistent entropycell organization

Mathematics Subject Classification ID

Persistent homology and applications, topological data analysis (55N31) Cell biology (92C37)

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(16)

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• A topological analysis of targeted In-111 uptake in SPECT images of murine tumors
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• Relational persistent homology for multispecies data with application to the tumor microenvironment
• Topological data analysis of zebrafish patterns
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• Cancer Fingerprints by Topological Data Analysis
• jHoles: a tool for understanding biological complex networks via clique weight rank persistent homology
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• Topological 3D-manifolds: A statistical study of the cells
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