Algorithmic construction of optimal block designs for two-colour cDNA microarray experiments using the linear mixed effects model

DOI10.1080/03610918.2018.1429617OpenAlexW2884336293WikidataQ129488013 ScholiaQ129488013MaRDI QIDQ5087467FDOQ5087467

Authors: Legesse Kassa Debusho, Dibaba Bayisa Gemechu, Linda M. Haines 

Publication date: 1 July 2022

Published in: Communications in Statistics. Simulation and Computation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1080/03610918.2018.1429617

zbMATH Keywords

complete enumerationmicroarray experiment\(A\)-, \textit{MV}-, \(D\)- and \(E\)-optimal designsarray exchange algorithmtreatment exchange algorithm

Mathematics Subject Classification ID

Statistical block designs (62K10)

Cites Work

• Efficient design and analysis of two colour factorial microarray experiments
• Numerical recipes. The art of scientific computing.
• Title not available (Why is that?)
• Experimental design for gene expression microarrays
• Theory of optimal designs
• The Coordinate-Exchange Algorithm for Constructing Exact Optimal Experimental Designs
• The construction of optimal designs for dose-escalation studies
• Near-Optimal Designs for Dual Channel Microarray Studies
• A note on robustness of D-optimal block designs for two-colour microarray experiments
• A-optimal designs for two-color microarray experiments for treatment-control and all-to-next contrasts
• Design Considerations for Efficient and Effective Microarray Studies
• Title not available (Why is that?)
• Algorithms for the construction of (M,S)-optimal block designs and row-column designs
• An Algorithm for Deriving Optimal Block Designs
• Incomplete block designs.
• Experimental design for multi-drug combination studies using signaling networks
• Experimental designs for 2‐colour cDNA microarray experiments
• Efficient block designs for 2-colour microarray experiments
• \(A\)- and \(D\)-optimal row-column designs for two-colour cDNA microarray experiments using linear mixed effects models

Cited In (3)

• A-optimal designs for treatment-control comparisons in microarray experiments with random block effects
• Highly efficient factorial designs for cDNA microarray experiments: use of approximate theory together with a step-up step-down procedure
• Augmented block designs for unreplicated trials

Uses Software

• GAUSS
• Mathematica
• daMA

This page was built for publication: Algorithmic construction of optimal block designs for two-colour cDNA microarray experiments using the linear mixed effects model

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5087467)