Multi-experiment parameter identifiability of ODEs and model theory

DOI10.1137/21M1389845MaRDI QIDQ5097685zbMATH OpenWikidataFDO

Authors Alexey Ovchinnikov, Gleb Pogudin, Anand Pillay, T. J. Scanlon

Publication date 31 August 2022

Published in SIAM Journal on Applied Algebra and Geometry (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/2011.10868

zbMATH Keywords

differential algebraparameter identifiabilitymodel theory of differential fieldsmultiple experiments

Mathematics Subject Classification ID

Classification theory, stability, and related concepts in model theory (03C45) Model-theoretic algebra (03C60) Inverse problems involving ordinary differential equations (34A55) General biology and biomathematics (92B05) System identification (93B30) Control/observation systems governed by ordinary differential equations (93C15) Differential algebra (12H05) Algebraic methods (93B25) Interpolation, preservation, definability (03C40) Differential algebra (13Nxx)

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Cites work

• scientific article; zbMATH DE number 1002918 (Why is no real title available?)
• scientific article; zbMATH DE number 3135927 (Why is no real title available?)
• scientific article; zbMATH DE number 976329 (Why is no real title available?)
• A probabilistic algorithm to test local algebraic observability in polynomial time
• Computing all identifiable functions of parameters for ODE models
• Global identifiability of differential models
• Identifiability of linear compartmental models: the singular locus
• Identifiability of nonlinear systems with application to HIV/AIDS models
• Input-Output Equations and Identifiability of Linear ODE Models
• Linear compartmental models: input-output equations and operations that preserve identifiability
• Markov models for ion channels: versatility versus identifiability and speed
• Mathematics and computation. A theory revolutionizing technology and science
• Model Theory
• Nemo/Hecke. Computer algebra and number theory packages for the Julia programming language
• On global identifiability for arbitrary model parametrizations
• Parameter identifiability and input-output equations
• Structural and practical identifiability analysis of outbreak models
• Structural identifiability of linear compartmental systems

Cited in

(7)

• Computing all identifiable functions of parameters for ODE models
• Multi-experiment parameter identifiability of ODEs and model theory
• Differential Elimination for Dynamical Models via Projections with Applications to Structural Identifiability
• An algorithm for finding globally identifiable parameter combinations of nonlinear ODE models using Gröbner bases
• Maple application for structural identifiability analysis of ODE models
• For differential equations with \(r\) parameters, \(2r+1\) experiments are enough for identification
• Weak identifiability for differential algebraic systems

Describes a project that uses

Uses Software

• Hecke
• Nemo
• COMBOS
• ObservabilityTest
• SIAN

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