Detecting locus acquisition events in gene trees

DOI10.4230/LIPICS.WABI.2017.5zbMATH Open1443.92119OpenAlexW3021878014MaRDI QIDQ5111795FDOQ5111795

Authors: Michał Aleksander Ciach, Anna Muszewska, Paweł Górecki 

Publication date: 27 May 2020

Full work available at URL: https://drops.dagstuhl.de/opus/volltexte/2017/7654/pdf/LIPIcs-WABI-2017-5.pdf/

Recommendations

• Inferring evolutionary scenarios in the duplication, loss and horizontal gene transfer model
• Indirect identification of horizontal gene transfer
• Towards identifying lateral gene transfer events
• Computing and Combinatorics
• Identifying a species tree subject to random lateral gene transfer

zbMATH Keywords

rankgene duplicationspeciationhorizontal gene transfertaxongene lossranked species tree

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Computational methods for problems pertaining to biology (92-08)

Cites Work

• Reconciling a gene tree to a species tree under the duplication cost model
• Title not available (Why is that?)
• DLS-trees: a model of evolutionary scenarios
• Large-Scale Multiple Sequence Alignment and Phylogeny Estimation

Cited In (5)

• Algorithms for detecting complete and partial horizontal gene transfers: theory and a practice
• How to identify laterally transferred genes?
• On partial gene transfer and its impact on gene tree reconstruction
• Inferring evolutionary scenarios in the duplication, loss and horizontal gene transfer model
• A new algorithm for inferring hybridization events based on the detection of horizontal gene transfers

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