Vaquita: fast and accurate identification of structural variation using combined evidence

DOI10.4230/LIPICS.WABI.2017.13zbMATH Open1443.92141MaRDI QIDQ5111809FDOQ5111809

Authors: Jongkyu Kim, Knut Reinert 

Publication date: 27 May 2020

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zbMATH Keywords

rank aggregationnext generation sequencingstructural variationvoting based metric

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Software, source code, etc. for problems pertaining to biology (92-04)

Cites Work

• Title not available (Why is that?)
• Comparing Partial Rankings
• A fast bit-vector algorithm for approximate string matching based on dynamic programming

Cited In (1)

• Vaquita

Uses Software

• BLAT
• SeqAn
• Bowtie 2
• LUMPY
• MetaSV
• svclassify
• Delly
• Pindel
• GASV
• GitHub

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