Markovian approaches to modeling intracellular reaction processes with molecular memory
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Publication:5218488
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(22)- Analysis of a non-Markov transcription model with nuclear RNA export and RNA nuclear retention
- Protein pattern formation induced by the joint effect of noise and delay in a multi-cellular system
- The dynamics of gene transcription Induced by variation in transcription kinetics
- Analysis of non-Markovian effects in generalized birth-death models
- Noise and delay can shape distribution functions in stochastic reaction dynamics
- Model-free inference of memory in conformational dynamics of a multi-domain protein
- Adaptive-step methods for Markov-based membrane models
- Memory effects in biochemical networks as the natural counterpart of extrinsic noise
- Assessing Markovian and delay models for single-nucleus RNA sequencing
- Analytical results for a non-Markovian process of gene expression with positive and negative feedbacks
- Optimal switching paths of a non-Markovian model of gene bursty expression
- Phase separation reduces cell-to-cell variability of transcriptional bursting
- Modelling non-Markovian fluctuations in intracellular biomolecular transport
- Kinetic characteristics of transcriptional bursting in a complex gene model with cyclic promoter structure
- Postponing production exponentially enhances the molecular memory of a stochastic switch
- Memory equations as reduced Markov processes
- Analysis of singularly perturbed stochastic chemical reaction networks motivated by applications to epigenetic cell memory
- A class of collision processes with memory and application to simple chemical reactions in a solvent
- Stochastic reaction networks in dynamic compartment populations
- Memory-induced bifurcation and oscillations in the chemical Brusselator model
- Modeling stochastic gene expression: from Markov to non-Markov models
- Accurate dynamics from self-consistent memory in stochastic chemical reactions with small copy numbers
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