Computing the Minimal Rebinding Effect Included in a Given Kinetics

DOI10.1137/13091124XzbMATH Open1317.82030OpenAlexW2022321246MaRDI QIDQ5250334FDOQ5250334

Authors: Marcus Weber, Konstantin Fackeldey 

Publication date: 19 May 2015

Published in: Multiscale Modeling & Simulation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1137/13091124x

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zbMATH Keywords

cooperativityconformation dynamicsmolecular kineticsrebindingrecrossing

Mathematics Subject Classification ID

Factorization of matrices (15A23) Theory of matrix inversion and generalized inverses (15A09) Determinants, permanents, traces, other special matrix functions (15A15) Dynamic continuum models (systems of particles, etc.) in time-dependent statistical mechanics (82C21)

Cites Work

• Robust Perron cluster analysis in conformation dynamics
• Meshless methods in conformation dynamics
• On the approximation quality of Markov state models
• Identification of almost invariant aggregates in reversible nearly uncoupled Markov chains
• Title not available (Why is that?)

Cited In (4)

• Overcoming the timescale barrier in molecular dynamics: Transfer operators, variational principles and machine learning
• Computing the minimal rebinding effect for nonreversible processes
• Mixed-integer programming for cycle detection in nonreversible Markov processes
• Finding dominant structures of nonreversible Markov processes

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