Latent variable models in population genetics

zbMATH Open1316.92049MaRDI QIDQ5263273FDOQ5263273

Authors: Flora Jay, Eric Frichot, Olivier Francois, M. G. B. Blum 

Publication date: 13 July 2015

Full work available at URL: http://journal-sfds.fr/article/view/80/

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zbMATH Keywords

Bayesian inferenceecological modelingpopulation genetic structure

Mathematics Subject Classification ID

Bayesian inference (62F15) Directional data; spatial statistics (62H11) Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10)

Cited In (11)

• A beta-mixture model for assessing genetic population structure
• Estimating effects of latent and measured genotypes in multilevel models
• Latent spatial models and sampling design for landscape genetics
• Generalized Character Process Models: Estimating the Genetic Basis of Traits That Cannot Be Observed and That Change with Age or Environmental Conditions
• Bayesian analysis of population structure based on linked molecular information
• Posterior contraction of the population polytope in finite admixture models
• Learning genetic population structures using minimization of stochastic complexity
• Spatial modelling of gene frequencies in the presence of undetectable alleles
• Hidden Markov random fields and the genetic structure of the Scandinavian brown bear population
• Fast inference of individual admixture coefficients using geographic data
• Modeling population structure under hierarchical Dirichlet processes

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