scientific article; zbMATH DE number 5494031

MaRDI QIDQ5301660zbMATH OpenFDO

Authors Abdul Salam Jarrah, Brandilyn Stigler, Elena S. Dimitrova, Reinhard Laubenbacher

Publication date 20 January 2009

Mathematics Subject Classification ID

Gröbner bases; other bases for ideals and modules (e.g., Janet and border bases) (13P10) Dynamical systems in biology (37N25) Classical flows, reactions, etc. in chemistry (92E20)

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• Algebraic methods for inferring biochemical networks: a maximum likelihood approach
• Geometric characterization of data sets with unique reduced Gröbner bases
• Forecasting polynomial dynamics
• Bistability and asynchrony in a Boolean model of the \textsc{L}-arabinose operon in \textit{Escherichia coli}
• Boolean models of the transport, synthesis, and metabolism of tryptophan in \textit{Escherichia coli}
• PoCaB: A Software Infrastructure to Explore Algebraic Methods for Bio-chemical Reaction Networks
• Noise-tolerant algebraic method for reconstruction of nonlinear dynamical systems
• Inferring biologically relevant models: nested canalyzing functions
• Data identification for improving gene network inference using computational algebra
• Estimating the volumes of the cones in a Gröbner fan
• A short history of algebraic statistics

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