Modelling the biomechanical properties of DNA using computer simulation

DOI10.1098/RSTA.2006.1906zbMATH Open1154.92311OpenAlexW2141219929WikidataQ36647490 ScholiaQ36647490MaRDI QIDQ5301909FDOQ5301909

Authors: Sarah A. Harris 

Publication date: 20 January 2009

Published in: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1098/rsta.2006.1906

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zbMATH Keywords

DNAmolecular dynamicsbiopolymers

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Biophysics (92C05) Biomechanics (92C10)

Cited In (14)

• A BIonic model for exchanging waves between water and DNA
• Computational and numerical simulations for the deoxyribonucleic acid (DNA) model
• Transport processes and irreversible thermodynamics analysis in tumoral systems
• A combined wormlike-chain and bead model for dynamic simulations of long linear DNA
• Modelling DNA loops using continuum and statistical mechanics One contribution of 16 to a Theme ‘The mechanics of DNA’
• Modelling the DNA topology: the effect of the loop bending on G-quadruplex stability
• Statistical mechanical modeling of a DNA nanobiostructure at the base-pair level
• Large-scale molecular dynamics simulation of DNA: implementation and validation of the AMBER98 force field in LAMMPS
• DNA strand break: Structural and electrostatic properties studied by molecular dynamics simulation
• Title not available (Why is that?)
• Numerical investigation of the micromechanical behavior of DNA immersed in a hydrodynamic flow
• Brownian dynamics simulation of nucleosome formation and disruption under stretching
• Numerical simulation of biological base pairs considering geometric and energetic criteria
• Thermodynamic approach to nano-properties of cell membrane

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