Cancer outlier differential gene expression detection

DOI10.1093/BIOSTATISTICS/KXL029MaRDI QIDQ5308151zbMATHOpenAlexWikidataFDO

Authors Baolin Wu

Publication date 27 September 2007

Published in Biostatistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1093/biostatistics/kxl029

zbMATH Keywords

robust\(t\)-statisticmicroarraycancer outlier profile analysisdifferential gene expression detection

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Medical applications (general) (92C50) Genetics and epigenetics (92D10)

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Cited in

(14)

• BOPA: A Bayesian hierarchical model for outlier expression detection
• A robust removing unwanted variation-testing procedure via \(\gamma\)-divergence
• Multi-group cancer outlier differential gene expression detection
• Generalized t‐statistic for two‐group classification
• Genomic outlier profile analysis: mixture models, null hypotheses, and nonparametric estimation
• Outlier reset CUSUM for the exploration of copy number alteration data
• Use of pretransformation to cope with extreme values in important candidate features
• MOST: detecting cancer differential gene expression
• Cancer outlier analysis based on mixture modeling of gene expression data
• The distribution-based \(p\)-value for the outlier sum in differential gene expression analysis
• Detecting differential gene expression in subgroups of a disease population
• Outlier sums for differential gene expression analysis
• Statistical inferences based on outliers for gene expression analysis
• A test for partial differential expression

Describes a project that uses

Uses Software

• Bioconductor

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