On generating optimal sparse probabilistic Boolean networks with maximum entropy from a positive stationary distribution.

DOI10.4208/EAJAM.191012.221112AMaRDI QIDQ5406930zbMATH OpenOpenAlexFDO

Authors Hao Jiang, Xi Chen, Yushan Qiu, Wai-Ki Ching

Publication date 4 April 2014

Published in East Asian Journal on Applied Mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.4208/eajam.191012.221112a

zbMATH Keywords

entropysparsitygenetic regulatory networksBoolean networksprobabilistic Boolean networkstransition probability matrixstationary probability distribution

Mathematics Subject Classification ID

Systems biology, networks (92C42)

Recommendations

• On construction of sparse probabilistic Boolean networks.
• Construction of probabilistic Boolean networks from a prescribed transition probability matrix: a maximum entropy rate approach.
• Generating probabilistic Boolean networks from a prescribed stationary distribution
• A modified orthogonal matching pursuit for construction of sparse probabilistic Boolean networks
• A matrix perturbation method for computing the steady-state probability distributions of probabilistic Boolean networks with gene perturbations

Cites work

• scientific article; zbMATH DE number 107482 (Why is no real title available?)
• A Mathematical Theory of Communication
• A matrix perturbation method for computing the steady-state probability distributions of probabilistic Boolean networks with gene perturbations
• Bioinformatics
• CONTROL OF STATIONARY BEHAVIOR IN PROBABILISTIC BOOLEAN NETWORKS BY MEANS OF STRUCTURAL INTERVENTION
• Construction of probabilistic Boolean networks from a prescribed transition probability matrix: a maximum entropy rate approach.
• Generating probabilistic Boolean networks from a prescribed stationary distribution
• Information Theory and Statistical Mechanics
• Markov chains: models, algorithms and applications
• Near-Optimal Signal Recovery From Random Projections: Universal Encoding Strategies?
• On computation of the steady-state probability distribution of probabilistic Boolean networks with gene perturbation
• On construction of sparse probabilistic Boolean networks.
• Probabilistic Boolean networks. The modeling and control of gene regulatory networks

Cited in

(5)

• Generating probabilistic Boolean networks from a prescribed stationary distribution
• On construction of sparse probabilistic Boolean networks.
• A modified orthogonal matching pursuit for construction of sparse probabilistic Boolean networks
• Construction of probabilistic Boolean networks from a prescribed transition probability matrix: a maximum entropy rate approach.
• Sparse probabilistic Boolean network problems: a partial proximal-type operator splitting method

This page was built for publication: On generating optimal sparse probabilistic Boolean networks with maximum entropy from a positive stationary distribution.

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5406930)