Finding quantitative trait loci genes with collaborative targeted maximum likelihood learning

DOI10.1016/J.SPL.2010.11.001zbMATH Open1218.62121OpenAlexW1984244634WikidataQ34960250 ScholiaQ34960250MaRDI QIDQ544627FDOQ544627

Authors: Sherri Rose, Hui Wang, Mark J. Van der Laan 

Publication date: 15 June 2011

Published in: Statistics \& Probability Letters (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc3090625

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zbMATH Keywords

machine learningcollaborative targeted maximum likelihood estimationsuper learner

Mathematics Subject Classification ID

Nonparametric estimation (62G05) Nonparametric regression and quantile regression (62G08) Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Genetics and epigenetics (92D10)

Cites Work

• Super Learner
• A Unified Semiparametric Framework for Quantitative Trait Loci Analyses, With Application to Spike Phenotypes
• Deletion/Substitution/Addition Algorithm in Learning with Applications in Genomics
• Discussion of: Treelets -- an adaptive multi-scale basis for sparse unordered data

Cited In (15)

• Quantitative trait loci mapping problem: an extinction-based multi-objective evolutionary algorithm approach
• Evaluating the impact of a HIV low-risk express care task-shifting program: a case study of the targeted learning roadmap
• Classification in postural style
• Efficient estimation of quantiles in missing data models
• Evaluating the robustness of targeted maximum likelihood estimators via realistic simulations in nutrition intervention trials
• Mark-specific hazard ratio model with missing multivariate marks
• Exact model comparisons in the plausibility framework
• Marginal integration for nonparametric causal inference
• Applying group Lasso to map the quantitative trait loci for recombinant inbred intercrosses lines derived from collaborative cross mice
• Estimation of a non-parametric variable importance measure of a continuous exposure
• A comparative genomics approach to the identification of QTL candidate genes
• A maximum likelihood-based method for mining major genes affecting a quantitative character
• A nonparametric super-efficient estimator of the average treatment effect
• Identifying Genes Associated with a Quantitative Trait or Quantitative Trait Locus via Selective Transcriptional Profiling
• Title not available (Why is that?)

Uses Software

• SuperLearner

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