Finding quantitative trait loci genes with collaborative targeted maximum likelihood learning

DOI10.1016/J.SPL.2010.11.001MaRDI QIDQ544627zbMATH OpenOpenAlexWikidataFDO

Authors Sherri Rose, Hui Wang, Mark J. Van der Laan

Publication date 15 June 2011

Published in Statistics \& Probability Letters (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc3090625

zbMATH Keywords

machine learningcollaborative targeted maximum likelihood estimationsuper learner

Mathematics Subject Classification ID

Nonparametric estimation (62G05) Nonparametric regression and quantile regression (62G08) Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Genetics and epigenetics (92D10)

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Cites work

• A Unified Semiparametric Framework for Quantitative Trait Loci Analyses, With Application to Spike Phenotypes
• Deletion/Substitution/Addition Algorithm in Learning with Applications in Genomics
• Discussion of: Treelets -- an adaptive multi-scale basis for sparse unordered data
• Super Learner

Cited in

(15)

• Quantitative trait loci mapping problem: an extinction-based multi-objective evolutionary algorithm approach
• Evaluating the impact of a HIV low-risk express care task-shifting program: a case study of the targeted learning roadmap
• Classification in postural style
• Efficient estimation of quantiles in missing data models
• Evaluating the robustness of targeted maximum likelihood estimators via realistic simulations in nutrition intervention trials
• Mark-specific hazard ratio model with missing multivariate marks
• Marginal integration for nonparametric causal inference
• Exact model comparisons in the plausibility framework
• Estimation of a non-parametric variable importance measure of a continuous exposure
• Applying group Lasso to map the quantitative trait loci for recombinant inbred intercrosses lines derived from collaborative cross mice
• A comparative genomics approach to the identification of QTL candidate genes
• A maximum likelihood-based method for mining major genes affecting a quantitative character
• A nonparametric super-efficient estimator of the average treatment effect
• Identifying Genes Associated with a Quantitative Trait or Quantitative Trait Locus via Selective Transcriptional Profiling
• scientific article; zbMATH DE number 2083810 (Why is no real title available?)

Describes a project that uses

Uses Software

• SuperLearner

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