Numerical methods for the dynamical reduction of the complexity of biochemical reaction processes
Qualitative investigation and simulation of ordinary differential equation models (34C60) Transformation and reduction of ordinary differential equations and systems, normal forms (34C20) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Research exposition (monographs, survey articles) pertaining to ordinary differential equations (34-02) Multiple scale methods for ordinary differential equations (34E13) Chemical kinetics in thermodynamics and heat transfer (80A30) Numerical methods for ordinary differential equations (65Lxx)
- Transactions on Computational Systems Biology I
- Novel trajectory based concepts for model and complexity reduction in (bio) chemical kinetics
- A method of `speed coefficients' for biochemical model reduction applied to the NF-\(\kappa\)B system
- Graphical reduction of reaction networks by linear elimination of species
- Physical understanding of complex multiscale biochemical models via algorithmic simplification: glycolysis in saccharomyces cerevisiae
- A geometric method for model reduction of biochemical networks with polynomial rate functions
- Transactions on Computational Systems Biology I
- Dynamic modeling of complex biological systems: a link between metabolic and macroscopic description
- Layered decomposition for the model order reduction of timescale separated biochemical reaction networks
- Scalar modeling and analysis of a 3D biochemical reaction model
- Structural Analysis in the Dynamical Modelling of Chemical Engineering Systems
- Graph-based, dynamics-preserving reduction of (bio)chemical systems
- Methods of model reduction for large-scale biological systems: a survey of current methods and trends
- Numerical Modeling for Nonlinear Biochemical Reaction Networks
- Physical understanding of complex multiscale biochemical models via algorithmic simplification: glycolysis in saccharomyces cerevisiae
- Complexity reduction preserving dynamical behavior of biochemical networks
- Push-forward method for piecewise deterministic biochemical simulations
- Novel trajectory based concepts for model and complexity reduction in (bio) chemical kinetics
- Highly accurate computation of dynamic sensitivities in metabolic reaction systems by a Taylor series method
- Use of implicit methods from general sensitivity theory to develop a systematic approach to metabolic control. II: Complex systems
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