Novel formulations for the sequence selection problem in de novo protein design with flexible templates
DOI10.1080/10556780600882041zbMATH Open1116.92027OpenAlexW2165465265MaRDI QIDQ5758166FDOQ5758166
Ho Ki Fung, Christodoulos A. Floudas, Martin S. Taylor
Publication date: 3 September 2007
Published in: Optimization Methods \& Software (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1080/10556780600882041
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- scientific article; zbMATH DE number 2081008
optimizationstructure predictiondrug designde novo protein designpeptide and protein design and discovery\(in silico\) sequence selectionprotein backbone flexibility
Cites Work
Cited In (5)
- Overcoming the Key Challenges in De Novo Protein Design: Enhancing Computational Efficiency and Incorporating True Backbone Flexibility
- Global optimality conditions for quadratic \(0-1\) optimization problems
- Computational comparison studies of quadratic assignment like formulations for the in silico sequence selection problem in De Novo protein design
- SOME EXPERIENCES WITH SOLVING SEMIDEFINITE PROGRAMMING RELAXATIONS OF BINARY QUADRATIC OPTIMIZATION MODELS IN COMPUTATIONAL BIOLOGY
- Protein structure optimization by side-chain positioning via beta-complex
Uses Software
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