A Markovian arrival stream approach to stochastic gene expression in cells

DOI10.1007/S00285-023-01913-9zbMATHOpenAlexMaRDI QIDQ6038682FDO

Authors

Publication date 2 May 2023

Published in Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00285-023-01913-9

zbMATH Keywords

matrix analytic methodsstochastic gene expressioninfinite-server queuesMarkov arrival process

Mathematics Subject Classification ID

Applications of continuous-time Markov processes on discrete state spaces (60J28) Biochemistry, molecular biology (92C40) Queueing theory (aspects of probability theory) (60K25)

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Cites work

• scientific article; zbMATH DE number 3866301 (Why is no real title available?)
• scientific article; zbMATH DE number 3656855 (Why is no real title available?)
• scientific article; zbMATH DE number 718142 (Why is no real title available?)
• scientific article; zbMATH DE number 1045886 (Why is no real title available?)
• Analysis of an infinite-server queue with batch Markovian arrival streams
• Analytical results for a multistate gene model
• Exact and approximate distributions of protein and mRNA levels in the low-copy regime of gene expression
• Fundamentals of matrix-analytic methods
• Introduction to Matrix Analytic Methods in Stochastic Modeling
• Kinetic Foundation of the Zero-Inflated Negative Binomial Model for Single-Cell RNA Sequencing Data
• Marked point processes as limits of Markovian arrival streams
• Markov Chains
• Markovian modelling of gene product synthesis
• Mathematical models of gene expression
• Some explicit formulas and computational methods for infinite-server queues with phase-type arrivals
• Statistics of nascent and mature RNA fluctuations in a stochastic model of transcriptional initiation, elongation, pausing, and termination
• Stochastic analysis of biochemical systems
• Stochastic gene expression in cells: a point process approach
• Stochastic gene expression with a multistate promoter: breaking down exact distributions
• Stochastic gene expression with delay
• Stochastic processes in cell biology

Cited in

(5)

• Stochastic gene expression in cells: a point process approach
• A stochastic approach to multi-gene expression dynamics
• Assessing Markovian and delay models for single-nucleus RNA sequencing
• Markovian modelling of gene product synthesis
• Analysis of a detailed multi-stage model of stochastic gene expression using queueing theory and model reduction

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