A Zero-Inflated Logistic Normal Multinomial Model for Extracting Microbial Compositions
DOI10.1080/01621459.2022.2044827OpenAlexW4213444226MaRDI QIDQ6144752FDOQ6144752
Authors: Yanyan Zeng, Hongyu Zhao, Tao Wang 
Publication date: 8 January 2024
Published in: Journal of the American Statistical Association (Search for Journal in Brave)
Full work available at URL: https://figshare.com/articles/journal_contribution/A_Zero-inflated_Logistic_Normal_Multinomial_Model_for_Extracting_Microbial_Compositions/19229768
Recommendations
- A logistic normal multinomial regression model for microbiome compositional data analysis
- Robust logistic zero-sum regression for microbiome compositional data
- Bayesian mixed effects models for zero-inflated compositions in microbiome data analysis
- Generalized linear models with linear constraints for microbiome compositional data
- Zero‐inflated Poisson factor model with application to microbiome read counts
- Microbiome Subcommunity Learning with Logistic-Tree Normal Latent Dirichlet Allocation
- Dirichlet-tree multinomial mixtures for clustering microbiome compositions
- Model-Based Microbiome Data Ordination: A Variational Approximation Approach
- A GLM-based latent variable ordination method for microbiome samples
- Modeling microbial abundances and dysbiosis with beta-binomial regression
compositional datazero-inflationlogistic normal distributionmultivariate count dataPoisson-multinomial
Cites Work
- Asymptotic Statistics
- A classification EM algorithm for clustering and two stochastic versions
- Title not available (Why is that?)
- A logistic normal multinomial regression model for microbiome compositional data analysis
- Pattern recognition and machine learning.
- Explaining variational approximations
- Title not available (Why is that?)
- A Dirichlet-Tree Multinomial Regression Model for Associating Dietary Nutrients with Gut Microorganisms
- A correlated topic model of science
- Probabilistic Principal Component Analysis
- Statistical Interpretation of Species Composition
- Poisson Matrix Recovery and Completion
- Minimax risk of matrix denoising by singular value thresholding
- Sparse pairwise likelihood estimation for multivariate longitudinal mixed models
- Scalable estimation and regularization for the logistic normal multinomial model
- Prediction analysis for microbiome sequencing data
- Computer age statistical inference. Algorithms, evidence, and data science
- Bayesian-multiplicative treatment of count zeros in compositional data sets
- Multisample estimation of bacterial composition matrices in metagenomics data
- Zero‐inflated Poisson factor model with application to microbiome read counts
- Beyond Prediction: A Framework for Inference With Variational Approximations in Mixture Models
- Frequentist consistency of variational Bayes
Cited In (5)
- Classification Rules that Include Neutral Zones and Their Application to Microbial Community Profiling
- Modeling association in microbial communities with clique loglinear models
- A multiview model for relative and absolute microbial abundances
- A Flexible Zero-Inflated Poisson-Gamma Model with Application to Microbiome Sequence Count Data
- Generalized linear models with linear constraints for microbiome compositional data
This page was built for publication: A Zero-Inflated Logistic Normal Multinomial Model for Extracting Microbial Compositions
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q6144752)
