Intrinsic disease maps using persistent cohomology

DOI10.3934/FODS.2021008MaRDI QIDQ6154225zbMATH OpenOpenAlexFDO

Authors Daniel Amin, Mikael Vejdemo Johansson

Publication date 14 February 2024

Published in Foundations of Data Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.3934/fods.2021008

zbMATH Keywords

circular coordinatesdisease mapshepatitis Cmalariapersistent cohomology

Mathematics Subject Classification ID

Persistent homology and applications, topological data analysis (55N31)

Recommendations

• Persistent cohomology and circular coordinates
• Persistent cohomology and circular coordinates
• Persistent Cohomology for Data With Multicomponent Heterogeneous Information
• Multiscale projective coordinates via persistent cohomology of sparse filtrations
• The ring of algebraic functions on persistence bar codes

Cites work

• Certified mapper: repeated testing for acyclicity and obstructions to the nerve lemma
• Persistent cohomology and circular coordinates
• Scikit-learn: machine learning in Python

Cited in

(1)

• Toroidal coordinates: decorrelating circular coordinates with lattice reduction

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