The genealogy, site frequency spectrum and ages of two nested mutant alleles

DOI10.1016/J.TPB.2009.02.001zbMATH Open1213.92040OpenAlexW2015836612WikidataQ64004733 ScholiaQ64004733MaRDI QIDQ615607FDOQ615607

Carsten Wiuf, Asger Hobolth

Publication date: 5 January 2011

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2009.02.001

zbMATH Keywords

coalescentage of mutationjump chainnested mutations

Mathematics Subject Classification ID

Problems related to evolution (92D15) Combinatorial probability (60C05)

Cites Work

• The coalescent
• On the number of segregating sites in genetical models without recombination
• Importance sampling for the infinite sites model
• The age of a mutation in a general coalescent tree
• Conditional genealogies and the age of a neutral mutant
• Extinction time and age of an allele in a large finite population.
• Lines of descent in the diffusion approximation of neutral Wright-Fisher models
• Times on trees, and the age of an allele

Cited In (8)

• Importance sampling for Lambda-coalescents in the infinitely many sites model
• An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations
• The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele
• Site frequency spectra from genomic SNP surveys
• Times on trees, and the age of an allele
• Importance sampling for lambda-coalescents in the infinitely many sites model
• The neutral frequency spectrum of linked sites
• Recoverability of ancestral recombination graph topologies

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