The genealogy, site frequency spectrum and ages of two nested mutant alleles

DOI10.1016/J.TPB.2009.02.001MaRDI QIDQ615607zbMATHOpenAlexWikidataFDO

Authors Asger Hobolth, Carsten Wiuf

Publication date 5 January 2011

Published in Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.tpb.2009.02.001

zbMATH Keywords

coalescentage of mutationjump chainnested mutations

Mathematics Subject Classification ID

Problems related to evolution (92D15) Combinatorial probability (60C05)

Recommendations

• Conditional genealogies and the age of a neutral mutant
• The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele
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• Times on trees, and the age of an allele

Cites work

• Conditional genealogies and the age of a neutral mutant
• Extinction time and age of an allele in a large finite population.
• Importance sampling for the infinite sites model
• Lines of descent in the diffusion approximation of neutral Wright-Fisher models
• On the number of segregating sites in genetical models without recombination
• The age of a mutation in a general coalescent tree
• The coalescent
• Times on trees, and the age of an allele

Cited in

(8)

• On the genealogy of a sample of neutral rare alleles.
• Recoverability of ancestral recombination graph topologies
• Site frequency spectra from genomic SNP surveys
• Importance sampling for lambda-coalescents in the infinitely many sites model
• Times on trees, and the age of an allele
• The neutral frequency spectrum of linked sites
• An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations
• The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele

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