New results on model reconstruction of Boolean networks with application to gene regulatory networks

DOI10.1002/MMA.8719MaRDI QIDQ6182945FDOQ6182945

Authors: Rong Zhao, Biao Wang, Lei Han, Jun-e Feng, Hongkun Wang 

Publication date: 22 December 2023

Published in: Mathematical Methods in the Applied Sciences (Search for Journal in Brave)

zbMATH Keywords

gene regulatory networksBoolean networkssemi-tensor productmodel reconstruction

Mathematics Subject Classification ID

Other model constructions (03C30) Nonclassical models (Boolean-valued, sheaf, etc.) (03C90) Boolean control/observation systems (93C29)

Cites Work

• An introduction to semi-tensor product of matrices and its applications
• A Linear Representation of Dynamics of Boolean Networks
• An efficient top-down search algorithm for learning Boolean networks of gene expression
• Identification of Boolean control networks
• Optimal control of Boolean control networks with average cost: a policy iteration approach
• On detectability of Boolean control networks
• Observability of Boolean networks via set controllability approach
• Observability of switched Boolean control networks using algebraic forms
• A Finite Convergence Criterion for the Discounted Optimal Control of Stochastic Logical Networks
• Stability and Stabilization of Boolean Networks with Stochastic Delays
• Feedback stabilization control design for switched Boolean control networks
• Categorization Problem on Controllability of Boolean Control Networks
• Bisimulations of Boolean Control Networks
• A Necessary and Sufficient Graphic Condition for the Original Disturbance Decoupling of Boolean Networks
• Identification of predictors of Boolean networks from observed attractor states
• Reduction and analysis of Boolean control networks by bisimulation

Cited In (2)

• The transition from differential equations to Boolean networks: A case study in simplifying a regulatory network model
• Model discovery and discrete inverse problems with cellular automata and Boolean networks

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