Exact transcript quantification over splice graphs
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Publication:6487643
Recommendations
- Deconvolution of base pair level RNA-seq read counts for quantification of transcript expression levels
- Statistical modeling of RNA-Seq data
- Quantifying alternative splicing from paired-end RNA-sequencing data
- A penalized likelihood approach for robust estimation of isoform expression
- Improved variational Bayes inference for transcript expression estimation
Cites work
Cited in
(7)- Yanagi: transcript segment library construction for RNA-seq quantification
- Deconvolution of base pair level RNA-seq read counts for quantification of transcript expression levels
- Transcript abundance estimation and the laminar packing problem
- Perplexity: Evaluating Transcript Abundance Estimation in the Absence of Ground Truth.
- A practical fpt algorithm for F<scp>low</scp> D<scp>ecomposition</scp> and transcript assembly
- Quantifying alternative splicing from paired-end RNA-sequencing data
- Safety and completeness in flow decompositions for RNA assembly
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