Improved variational Bayes inference for transcript expression estimation
DOI10.1515/SAGMB-2013-0054zbMATH Open1296.92064OpenAlexW2123901911WikidataQ51124416 ScholiaQ51124416MaRDI QIDQ743618FDOQ743618
Authors: Panagiotis Papastamoulis, James Hensman, Peter Glaus, Magnus Rattray 
Publication date: 25 September 2014
Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1515/sagmb-2013-0054
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- Finite mixture and Markov switching models.
- Estimating marginal likelihoods for mixture and Markov switching models using bridge sampling techniques*
- The Calculation of Posterior Distributions by Data Augmentation
- Variational approximations in Bayesian model selection for finite mixture distributions
- Marginal Likelihood from the Gibbs Output
- Sampling-Based Approaches to Calculating Marginal Densities
- Adaptive stochastic approximation by the simultaneous perturbation method
- An introduction to variational methods for graphical models
- Multivariate stochastic approximation using a simultaneous perturbation gradient approximation
- Parameter estimation for generalized Dirichlet distributions from the sample estimates of the first and the second moments of random variables
Cited In (5)
- Variational Bayesian approach for analyzing interval-censored data under the proportional hazards model
- Perplexity: Evaluating Transcript Abundance Estimation in the Absence of Ground Truth.
- Exact transcript quantification over splice graphs
- Bayesian estimation of differential transcript usage from RNA-seq data
- Deconvolution of base pair level RNA-seq read counts for quantification of transcript expression levels
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