Semiparametric modeling of autonomous nonlinear dynamical systems with application to plant growth

DOI10.1214/11-AOAS459zbMATH Open1228.62121arXiv0906.3501OpenAlexW3098508414WikidataQ125974288 ScholiaQ125974288MaRDI QIDQ652370FDOQ652370

Authors: Debashis Paul, Jie Peng, Prabir Burman 

Publication date: 14 December 2011

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Abstract: In this paper, we propose a semi-parametric model for autonomous nonlinear dynamical systems and devise an estimation procedure for model fitting. This model incorporates subject-specific effects and can be viewed as a nonlinear semi-parametric mixed effects model. We also propose a computationally efficient model selection procedure. We prove consistency of the proposed estimator under suitable regularity conditions. We show by simulation studies that the proposed estimation as well as model selection procedures can efficiently handle sparse and noisy measurements. Finally, we apply the proposed method to a plant growth data used to study growth displacement rates within meristems of maize roots under two different experimental conditions.

Full work available at URL: https://arxiv.org/abs/0906.3501

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zbMATH Keywords

cross-validationLevenberg-Marquardt methodgrowth displacement rate

Mathematics Subject Classification ID

Inference from stochastic processes (62M99) Dynamical systems in biology (37N25) Plant biology (92C80)

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Cited In (5)

• Modelling temporal biomarkers with semiparametric nonlinear dynamical systems
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Uses Software

• fda (R)
• gss

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