Conservative, unconditionally stable discretization methods for Hamiltonian equations, applied to wave motion in lattice equations modeling protein molecules

DOI10.1016/J.PHYSD.2011.09.012zbMATH Open1228.92007OpenAlexW1966487421MaRDI QIDQ655557FDOQ655557

Authors: Brenton J. LeMesurier 

Publication date: 4 January 2012

Published in: Physica D (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.physd.2011.09.012

Recommendations

• Studying Davydov's ODE model of wave motion in \(\alpha \)-helix protein using exactly energy-momentum conserving discretizations for Hamiltonian systems
• Conserved quantities of some Hamiltonian wave equations after full discretization
• Conservative multiquadric quasi-interpolation method for Hamiltonian wave equations
• scientific article; zbMATH DE number 4055208
• Conservation of energy, momentum and actions in numerical discretizations of non-linear wave equations

zbMATH Keywords

Hamiltonian systemsunconditional stabilitylattice wave equationsconservative time discretizationsprotein energeticsmolecular chains

Mathematics Subject Classification ID

General mathematical topics and methods in quantum theory (81Q99) Biophysics (92C05)

Cites Work

• Title not available (Why is that?)
• Geometric Numerical Integration
• Lectures on Mechanics
• Geometric integration using discrete gradients
• Derivation of the discrete conservation laws for a family of finite difference schemes
• Symplectic integration of Hamiltonian systems
• Finite Difference Calculus Invariant Structure of a Class of Algorithms for the Nonlinear Klein–Gordon Equation
• Title not available (Why is that?)
• Solitons in Molecular Systems
• Lie-Poisson Hamilton-Jacobi theory and Lie-Poisson integrators
• Time integration and discrete Hamiltonian systems
• The Vibrational Structure of Davydov Solitons
• Exact energy-momentum conserving algorithms and symplectic schemes for nonlinear dynamics
• On the stability of symplectic and energy-momentum algorithms for nonlinear Hamiltonian systems with symmetry
• Exact energy and momentum conserving algorithms for general models in nonlinear elasticity

Cited In (1)

• Studying Davydov's ODE model of wave motion in \(\alpha \)-helix protein using exactly energy-momentum conserving discretizations for Hamiltonian systems

This page was built for publication: Conservative, unconditionally stable discretization methods for Hamiltonian equations, applied to wave motion in lattice equations modeling protein molecules

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q655557)