Diletter circular codes over finite alphabets

DOI10.1016/J.MBS.2017.10.001MaRDI QIDQ680445zbMATH OpenOpenAlexWikidataFDO

Authors E. Fimmel, Christian J. Michel, Lutz Strüngmann

Publication date 23 January 2018

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.mbs.2017.10.001

zbMATH Keywords

finite alphabetenumerative combinatoricsdiletter circular code

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Neural biology (92C20) Algorithms on strings (68W32)

Recommendations

• Dinucleotide circular codes
• Maximal dinucleotide and trinucleotide circular codes
• Strong trinucleotide circular codes
• Mixed circular codes
• scientific article; zbMATH DE number 7731171

Cites work

• scientific article; zbMATH DE number 51019 (Why is no real title available?)
• A stochastic model of gene evolution with chaotic mutations
• An evolutionary analytical model of a complementary circular code simulating the protein coding genes, the \(5'\) and \(3'\) regions
• Circular code motifs in transfer and 16S ribosomal RNAs: a possible translation code in genes
• Comma-Free Codes
• Dinucleotide circular codes
• Dinucleotide circular codes and bijective transformations
• Maximal dinucleotide and trinucleotide circular codes
• Maximal dinucleotide comma-free codes
• The maximal \(C^3\) self-complementary trinucleotide circular code \(X\) in genes of bacteria, eukaryotes, plasmids and viruses
• Varieties of comma-free codes
• \(n\)-nucleotide circular codes in graph theory

Cited in

(10)

• Dinucleotide circular codes
• Circular tessera codes in the evolution of the genetic code
• A hierarchy for circular codes
• scientific article; zbMATH DE number 7731171 (Why is no real title available?)
• Mixed circular codes
• Graded alphabets, circular codes, free Lie algebras and comma-free codes
• Circular codes, symmetries and transformations
• Strong comma-free codes in genetic information
• A 2006 review of circular codes in genes
• The relation between \(k\)-circularity and circularity of codes

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Uses Software

• DISTAN

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