Modelling the activation of alkaline pH response transcription factor PacC in \textit{Aspergillus nidulans}: involvement of a negative feedback loop

DOI10.1016/J.JTBI.2013.02.006MaRDI QIDQ745054zbMATH OpenOpenAlexWikidataFDO

Authors Ruian Ke, Ken Haynes, Jaroslav Stark

Publication date 13 October 2015

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2013.02.006

zbMATH Keywords

negative feedback loopPacCpH regulation

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Recommendations

• Mathematical modelling and assessment of the ph homeostasis mechanisms in \textit{Aspergillus niger} while in citric acid producing conditions
• The metabolic pH response in Lactococcus lactis: An integrative experimental and modelling approach
• Modeling the effects of pH variation and bacteriocin synthesis on bacterial growth
• pH-induced gene regulation of solvent production by \textit{Clostridium acetobutylicum} in continuous culture: parameter estimation and sporulation modelling
• Modeling and parameter estimation of a nonlinear switching system in fed-batch culture with ph feedback
• Modeling and simulation of a bacterial biofilm that is controlled by pH and protonated lactic acids
• Modeling feedback loops in the H-NS-mediated regulation of the \textit{Escherichia coli bgl} operon
• Mathematical modelling of the \(Aux/IAA\) negative feedback loop
• Rule-based modeling of transcriptional attenuation at the tryptophan operon

Cites work

• A methodology for performing global uncertainty and sensitivity analysis in systems biology
• Feedback loops shape cellular signals in space and time

Cited in

(2)

• Mathematical modelling and assessment of the ph homeostasis mechanisms in \textit{Aspergillus niger} while in citric acid producing conditions
• Deciphering environmental signal integration in \(\sigma^{54}\)-dependent promoters with a simple mathematical model

This page was built for publication: Modelling the activation of alkaline pH response transcription factor PacC in \textit{Aspergillus nidulans}: involvement of a negative feedback loop

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q745054)