Developing Itô stochastic differential equation models for neuronal signal transduction path\-ways

DOI10.1016/j.compbiolchem.2006.04.002zbMath1098.92035WikidataQ51936340 ScholiaQ51936340MaRDI QIDQ849530

Keijo Ruohonen, Tiina Manninen, Marja-Leena Linne

Publication date: 31 October 2006

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2006.04.002

zbMATH Keywords

Itô stochastic differential equation; chemical Langevin equation; Gillespie stochastic simulation algorithm; neuronal signal transduction

Mathematics Subject Classification ID

60H10: Stochastic ordinary differential equations (aspects of stochastic analysis)

92C20: Neural biology

92C55: Biomedical imaging and signal processing

92C45: Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.)

60J70: Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.)

Related Items

Physically consistent simulation of mesoscale chemical kinetics: the non-negative FIS-\(\alpha\) method, Comparison of Markov Chain and Stochastic Differential Equation Population Models Under Higher-Order Moment Closure Approximations

Uses Software

• STOCHSIM

Cites Work

• The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior
• Stochastic approaches for modelling in vivo reactions
• An Algorithmic Introduction to Numerical Simulation of Stochastic Differential Equations
• Numerical methods for strong solutions of stochastic differential equations: an overview
• The multivariate Langevin and Fokker–Planck equations
• Balanced Implicit Methods for Stiff Stochastic Systems
• Computational Methods in Systems Biology
• Stochastic differential equations. An introduction with applications.