PTreeRec: Phylogenetic Tree Reconstruction based on genome BLAST distance

DOI10.1016/J.COMPBIOLCHEM.2006.04.003MaRDI QIDQ849540zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Riqiang Deng, Mingsong Huang, Jinwen Wang, Yuansen Huang, Jie Yang, Jinghua Feng, Xunzhang Wang

Publication date 31 October 2006

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2006.04.003

zbMATH Keywords

BLAST distancemaximal segment pairsphylogenetic treePTreeRecwhole-genome sequences

Mathematics Subject Classification ID

Problems related to evolution (92D15)

Recommendations

• Research in Computational Molecular Biology
• Alignment- and reference-free phylogenomics with colored de Bruijn graphs
• A DISCRIMINATION MEASURE FOR PHYLOGENETIC TREE CONSTRUCTION
• Phylogenetic tree construction using simple SVD based distance metrics
• scientific article; zbMATH DE number 2086792

Cited in

(1)

• Alignment- and reference-free phylogenomics with colored de Bruijn graphs

Describes a project that uses

Uses Software

• PTreeRec
• PHYLIP
• ATV

This page was built for publication: PTreeRec: Phylogenetic Tree Reconstruction based on genome BLAST distance

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q849540)