PHYLIP
From MaRDI portal
Cited in
(only showing first 100 items - show all)- WSE, a new sequence distance measure based on word frequencies
- Multidimensional cluster stability analysis from a Brazilian Bradyrhizobium sp. RFLP/PCR data set
- Why neighbor-joining works
- Genetic relationship between Kangal, Akbash and other dog populations
- Phylogenetic inference from binary sequences reduced by primary DNA sequences
- A complexity-based measure and its application to phylogenetic analysis
- Increased accuracy in analytical molecular distance estimation
- PyPop
- Probabilistic models in cluster analysis
- Rphylip
- LVB
- ASTRAL-Pro
- FastMulRFS
- Information categorization approach to literary authorship disputes
- EdiPy
- TreeSOM
- SCHUR
- Inferring evolutionary trees with strong combinatorial evidence
- Geometry of the space of phylogenetic trees
- Comparative genomic analysis by microbial COGs self-attraction rate
- Comparing evolutionary distances via adaptive distance functions
- Genome analysis with the conditional multinomial distribution profile
- ape
- A new distributed alignment-free approach to compare whole proteomes
- A novel statistical measure for sequence comparison on the basis of \(k\)-word counts
- PULLPRU: a practical approach to estimate phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterion
- A universal scaling law determines time reversibility and steady state of substitutions under selection
- Financial time series analysis based on information categorization method
- Comparison of protein secondary structures based on backbone dihedral angles
- Markov invariants, plethysms, and phylogenetics
- fastDNAml
- A fixed-parameter algorithm for minimum quartet inconsistency
- MEGA4
- MrBayes
- RAxML
- PAUP*
- FindSteinerTree
- BIONJ
- MAFFT
- MODELTEST
- LASER
- Seq-Gen
- phangorn
- Clustal
- EPoS
- Notung
- MEGA
- Registering the evolutionary history in individual-based models of speciation
- PTreeRec
- Tumor classification using phylogenetic methods on expression data
- Surnames and dialects in France: population structure and cultural evolution
- Alignments of mitochondrial genome arrangements: applications to metazoan phylogeny
- Multidimensional scaling analysis of the solar system objects
- Cluster analysis of the large natural satellites in the solar system
- Gaphyl
- bioperl
- Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition
- Sequence comparison via polar coordinates representation and curve tree
- PhyML
- PAML
- Cluster-C
- Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
- Andalò di Negro's \textit{De compositione astrolabii}: a critical edition with English translation and notes
- Arlequin
- Consistency and inconsistency of consensus methods for inferring species trees from gene trees in the presence of ancestral population structure
- Robust classifying of prokaryotic genomes
- ClustalW
- On finding the Adams consensus tree
- Numerical characteristics of word frequencies and their application to dissimilarity measure for sequence comparison
- Extraction of high quality \(k\)-words for alignment-free sequence comparison
- SplitsTree
- pIQPNNI
- CLUSTAL
- Inferring phylogenetic trees using answer set programming
- EdiPy: A resource to simulate the evolution of plant mitochondrial genes under the RNA editing
- Vertebrate 2xRBD hnRNP proteins: a comparative analysis of genome, mRNA and protein sequences
- Integer linear programming as a tool for constructing trees from quartet data
- TreeSOM: cluster analysis in the self-organizing map
- Group-theoretic models of the inversion process in bacterial genomes
- Constructing rooted supertrees using distances
- DASACT
- Study of LZ-word distribution and its application for sequence comparison
- Linear regression model of short k-word: a similarity distance suitable for biological sequences with various lengths
- Minimum tree cost quartet puzzling
- TreeOfTrees method to evaluate the congruence between gene trees
- Phyloquart
- SOM_PAK
- Analysis and visualization of seismic data using mutual information
- Bootstrapping algorithms for gene duplication and speciation events
- Rose
- IQ-TREE
- SimPhy
- AVID
- TOUCAN
- GARSA
- PCAP
- ESTAP
- YACOP
- AMADA
- RIATA-HGT
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