Seq-Gen
From MaRDI portal
Cited in
(71)- Fast neighbor joining
- Why neighbor-joining works
- A new quartet approach for reconstructing phylogenetic trees: Quartet joining method
- EPA-ng
- PhyloGeoTool
- INSTRAL
- UShER
- HmmUFOtu
- Classification of molecular sequence data using Bayesian phylogenetic mixture models
- fastDNAml
- PHYLIP
- MrBayes
- RAxML
- SeqinR
- BIONJ
- MODELTEST
- LASER
- phangorn
- Clustal
- EPoS
- Bayesian-weighted triplet and quartet methods for species tree inference
- GenRGenS
- Site pattern probabilities under the multispecies coalescent and a relaxed molecular clock: theory and applications
- jpHMM
- Consistency and inconsistency of consensus methods for inferring species trees from gene trees in the presence of ancestral population structure
- BEAST
- GPUTeraSort
- A comparative analysis of multidimensional features of objects resembling sets of graphs
- Minimum tree cost quartet puzzling
- TreeOfTrees method to evaluate the congruence between gene trees
- A Bayesian approach to modelling reticulation events with application to the ribosomal protein gene rps11 of flowering plants
- Bootstrapping algorithms for gene duplication and speciation events
- IQ-TREE
- A variance-components model for distance-matrix phylogenetic reconstruction
- Investigating the performance of AIC in selecting phylogenetic models
- r8s
- TreeOfTrees
- QNet
- Semi-automatic selection of summary statistics for ABC model choice
- kdetrees
- Analysis of phylogenetics and evolution with R
- jModelTest
- RDP2
- Hetero
- STEM-hy
- pplacer
- Mash
- FastTree
- Quartets MaxCut
- HyDe
- ALPHA
- PhyloNetworks
- scientific article; zbMATH DE number 1945176 (Why is no real title available?)
- RAT
- MSCquartets
- Scoredist
- \(D_{\text{GEN}}\): a test statistic for detection of general introgression scenarios
- siteFiNDER 3D
- Rate4Site
- CONSEL
- Spectral method for reconstructing phylogenetic tree
- Co-evolution and information signals in biological sequences
- SEPP
- Bootstrapping phylogenetic trees: theory and methods
- SaGePhy
- wQFM
- On the inadmissibility of Watterson's estimator
- Principal components analysis in the space of phylogenetic trees
- Generation of the exact distribution and simulation of matched nucleotide sequences on a phylogenetic tree
- Counting labeled transitions in continuous-time Markov models of evolution
- Two-way Bayesian hierarchical phylogenetic models: an application to the co-evolution of gp120 and gp41 during and after enfuvirtide treatment
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