BIONJ

swMATH8301MaRDI QIDQ20311FDOQ20311

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Official website: http://www.atgc-montpellier.fr/bionj/

Cited In (74)

• Title not available (Why is that?)
• Minimum tree cost quartet puzzling
• An algorithm for the fitting of a tree metric according to a weighted least-squares criterion
• Modeling the distribution of distance data in Euclidean space
• A variance-components model for distance-matrix phylogenetic reconstruction
• Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
• A `stochastic safety radius' for distance-based tree reconstruction
• Reconstruction of large phylogenetic trees: a parallel approach
• The neighbor-net algorithm
• Using the tangle: A consistent construction of phylogenetic distance matrices for quartets
• Determining phylogenetic networks from inter-taxa distances
• An algebraic hypothesis about the primeval genetic code architecture
• Geometric combinatorics and computational molecular biology: branching polytopes for RNA sequences
• An algorithm for reconstructing ultrametric tree-child networks from inter-taxa distances
• Why neighbor-joining works
• Comparing evolutionary distances via adaptive distance functions
• fastDNAml
• MEGA4
• MrBayes
• PHYLIP
• PAUP*
• FindSteinerTree
• Clustal
• LASER
• MODELTEST
• Seq-Gen
• MEGA
• HMMER
• CompLearn
• Mbetoolbox
• PAML
• pIQPNNI
• SplitsTree
• A fast quartet tree heuristic for hierarchical clustering
• Mugsy
• SABmark
• NINJA
• Phylo-MCOA
• TNT
• ExaBayes
• iGTP
• MulRF
• ProtTest 3
• pplacer
• PAL2NAL
• FastMe
• FastTree
• DACTAL
• iGLASS
• OrthoMCL
• MSOAR
• Rec-I-DCM3
• CLUSTAG
• SuperFine
• TreeCluster
• METREE
• The minimum evolution problem: Overview and classification
• BAPS 2
• MLTreeMap
• SEPP
• Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
• PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals
• Analysis of phylogenetics and evolution with R
• Reconstructing phylogenies from gene-content and gene-order data
• HmmUFOtu
• INSTRAL
• Consistency of the QNet algorithm for generating planar split networks from weighted quartets
• Phylogenetic trees and Euclidean embeddings
• Bioinformatics. Volume I. Data, sequence analysis, and evolution
• Choosing the tree which actually best explains the data: another look at the bootstrap in phylogenetic reconstruction.
• Progressive clustering based method for protein function prediction
• The triangles method to build \(X\)-trees from incomplete distance matrices
• Two local dissimilarity measures for weighted graphs with application to protein interaction networks
• A novel approach to phylogenetic trees: d‐Dimensional geometric Steiner trees

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