BIONJ
From MaRDI portal
Cited in
(74)- Why neighbor-joining works
- Consistency of the QNet algorithm for generating planar split networks from weighted quartets
- INSTRAL
- HmmUFOtu
- Choosing the tree which actually best explains the data: another look at the bootstrap in phylogenetic reconstruction.
- Comparing evolutionary distances via adaptive distance functions
- fastDNAml
- An algorithm for the fitting of a tree metric according to a weighted least-squares criterion
- PHYLIP
- MEGA4
- MrBayes
- PAUP*
- FindSteinerTree
- MODELTEST
- LASER
- Seq-Gen
- Clustal
- MEGA
- HMMER
- CompLearn
- Mbetoolbox
- PAML
- Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
- SplitsTree
- pIQPNNI
- Reconstruction of large phylogenetic trees: a parallel approach
- Minimum tree cost quartet puzzling
- The triangles method to build X-trees from incomplete distance matrices
- Mugsy
- SABmark
- A `stochastic safety radius' for distance-based tree reconstruction
- A variance-components model for distance-matrix phylogenetic reconstruction
- Modeling the distribution of distance data in Euclidean space
- Geometric combinatorics and computational molecular biology: branching polytopes for RNA sequences
- Determining phylogenetic networks from inter-taxa distances
- Phylo-MCOA
- An algorithm for reconstructing ultrametric tree-child networks from inter-taxa distances
- Analysis of phylogenetics and evolution with R
- ProtTest 3
- ExaBayes
- iGTP
- MulRF
- Progressive clustering based method for protein function prediction
- pplacer
- PAL2NAL
- FastMe
- FastTree
- OrthoMCL
- SuperFine
- TNT
- iGLASS
- DACTAL
- Rec-I-DCM3
- NINJA
- MSOAR
- CLUSTAG
- scientific article; zbMATH DE number 1945176 (Why is no real title available?)
- TreeCluster
- METREE
- Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
- Phylogenetic trees and Euclidean embeddings
- PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
- BAPS 2
- A novel approach to phylogenetic trees: d‐Dimensional geometric Steiner trees
- The minimum evolution problem: Overview and classification
- SEPP
- MLTreeMap
- Reconstructing phylogenies from gene-content and gene-order data
- The neighbor-net algorithm
- A fast quartet tree heuristic for hierarchical clustering
- An algebraic hypothesis about the primeval genetic code architecture
- Using the tangle: A consistent construction of phylogenetic distance matrices for quartets
- Two local dissimilarity measures for weighted graphs with application to protein interaction networks
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