Mash
From MaRDI portal
Cited in
(47)- SPARSE
- Taxator-tk
- metaSPAdes
- OGRE
- oblr
- Improving MinHash via the containment index with applications to metagenomic analysis
- An impossibility result for phylogeny reconstruction from \(k\)-mer counts
- Quantifying hierarchical conflicts in homology statements
- Estimating sequence similarity from read sets for clustering next-generation sequencing data
- \textit{De novo} clustering of long-read transcriptome data using a greedy, quality-value based algorithm
- GAGE
- SSAKE
- KMC
- CLARK
- isONclust
- MeShClust
- DNACLUST
- Starcode
- EasyCluster2
- parasail
- LSC
- Cogent
- Grouper
- Corset
- SlideSort
- Rainbow
- d2_cluster
- sourmash
- TreeCluster
- TIPP
- Compareads
- BioBloom Tools
- BLESS
- GemSIM
- PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals
- STAR
- BAPS 2
- Squeakr
- Kraken
- Accurate Reconstruction of Microbial Strains from Metagenomic Sequencing Using Representative Reference Genomes
- CONSULT-II
- Sigma
- MetaPhlAn
- ART
- MetaPhyler
- MALT
- panX
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