Kraken
From MaRDI portal
Cited in
(44)- SPARSE
- Taxator-tk
- CheckM
- MetaCoAG
- METAMVGL
- SolidBin
- metaSPAdes
- GraphBin
- metaFlye
- Winnowing
- AMBER
- Centrifuge
- MaxBin
- MetaBAT
- oblr
- MetaCoAG: binning metagenomic contigs via composition, coverage and assembly graphs
- MCFDR
- Quake
- Fast approximation of frequent \(k\)-mers and applications to metagenomics
- GAGE
- SPAdes
- KMC
- Turtle
- MetaProb
- CLARK
- Minimap2
- Mash
- Stochastic sampling of structural contexts improves the scalability and accuracy of RNA 3D module identification
- KmerStream
- SAKEIMA
- Squeakr
- Kmerlight
- RNA-Skim
- Accurate Reconstruction of Microbial Strains from Metagenomic Sequencing Using Representative Reference Genomes
- HumGut
- CONSULT-II
- Sigma
- BMC3C
- MetaPhlAn
- ART
- MetaPhyler
- MALT
- TwoPaCo
- panX
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