Kraken
From MaRDI portal
Cited in
(44)- Fast approximation of frequent \(k\)-mers and applications to metagenomics
- MCFDR
- Quake
- GAGE
- SPAdes
- KMC
- Turtle
- CLARK
- MetaProb
- Mash
- Minimap2
- KmerStream
- Kmerlight
- SAKEIMA
- RNA-Skim
- Squeakr
- Accurate Reconstruction of Microbial Strains from Metagenomic Sequencing Using Representative Reference Genomes
- MetaPhlAn
- panX
- Sigma
- HumGut
- CONSULT-II
- MetaPhyler
- TwoPaCo
- Winnowing
- AMBER
- SPARSE
- Taxator-tk
- CheckM
- GraphBin
- MetaCoAG
- METAMVGL
- metaSPAdes
- metaFlye
- Centrifuge
- MaxBin
- MetaBAT
- oblr
- SolidBin
- Stochastic sampling of structural contexts improves the scalability and accuracy of RNA 3D module identification
- ART
- MALT
- MetaCoAG: binning metagenomic contigs via composition, coverage and assembly graphs
- BMC3C
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