MetaProb

MaRDI QIDQ35223swMATHFDO

Official website https://bitbucket.org/samu661/metaprob

Described by source

• Metagenomic reads binning with spaced seeds

Cited in

(31)

• Fast approximation of frequent \(k\)-mers and applications to metagenomics
• Turtle
• CLARK
• MetaSim
• SpEED
• ONE
• vg
• LZ77
• MetaCluster
• KmerStream
• Kmerlight
• Kraken
• SAKEIMA
• RNA-Skim
• Squeakr
• Can formal languages help pangenomics to represent and analyze multiple genomes?
• Fast spaced seed hashing
• AMBER
• CheckM
• GraphBin
• MetaCoAG
• METAMVGL
• metaSPAdes
• metaFlye
• Centrifuge
• MaxBin
• MetaBAT
• oblr
• SolidBin
• MetaCoAG: binning metagenomic contigs via composition, coverage and assembly graphs
• BMC3C

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