vg

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Official website https://github.com/vgteam/vg#vg

Source code repository https://github.com/vgteam/vg

Cited in

(31)

• Mason
• Vargas
• AStarix
• hybridSPAdes
• Wheeler languages
• Walk-preserving transformation of overlapped sequence graphs into blunt sequence graphs with GetBlunted
• Can formal languages help pangenomics to represent and analyze multiple genomes?
• Linear time construction of indexable elastic founder graphs
• Fast and optimal sequence-to-graph alignment guided by seeds
• Minimap2
• HISAT
• Bowtie 2
• deBGA
• SplitMEM
• PALMapper
• openCypher
• LZ77
• BWA
• LoRDEC
• r-index
• Indexing variation graphs
• SPUMONI
• Eulertigs
• pufferfish2
• BrownieAligner
• PuffAligner
• MONI
• GraphAligner
• ART
• TwoPaCo
• Graphs cannot be indexed in polynomial time for sub-quadratic time string matching, unless SETH fails

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