A second-order, unconditionally positive, mass-conserving integration scheme for biochemical systems
DOI10.1016/J.APNUM.2005.12.001zbMATH Open1123.65067OpenAlexW2572911505MaRDI QIDQ857024FDOQ857024
Jorn Bruggeman, Hans Burchard, B. P. Sommeijer, B. W. Kooi
Publication date: 14 December 2006
Published in: Applied Numerical Mathematics (Search for Journal in Brave)
Full work available at URL: https://ir.cwi.nl/pub/11715
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mass conservationRunge-Kutta methodsbiochemical systemsunconditional positivityPatankar-type schemes
Biochemistry, molecular biology (92C40) Nonlinear ordinary differential equations and systems (34A34) Multistep, Runge-Kutta and extrapolation methods for ordinary differential equations (65L06) Numerical methods for initial value problems involving ordinary differential equations (65L05)
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Cited In (18)
- Lyapunov functions and global stability for a discretized multigroup SIR epidemic model
- \textit{GeCo}: geometric conservative nonstandard schemes for biochemical systems
- Extension of modified Patankar-Runge-Kutta schemes to nonautonomous production-destruction systems based on Oliver's approach
- Second-order unconditional positive preserving schemes for non-equilibrium reactive flows with mass and mole balance
- A second-order asymptotic-preserving and positivity-preserving discontinuous Galerkin scheme for the Kerr–Debye model
- An improved and generalized second order, unconditionally positive, mass conserving integration scheme for biochemical systems
- Framework for solving dynamics of Ca2+ ion concentrations in liver cells numerically: Analysis of a non‐negativity‐preserving non‐standard finite‐difference method
- A second-order positivity preserving scheme for semilinear parabolic problems
- On the dynamics of first and second order GeCo and gBBKS schemes
- An unconditionally positive and global stability preserving NSFD scheme for an epidemic model with vaccination
- Unconditionally positive and conservative third order modified Patankar-Runge-Kutta discretizations of production-destruction systems
- Combination of nonstandard schemes and Richardson's extrapolation to improve the numerical solution of population models
- On the stability of strong-stability-preserving modified Patankar–Runge–Kutta schemes
- Positivity-preserving methods for ordinary differential equations
- On order conditions for modified Patankar-Runge-Kutta schemes
- On the Stability of Unconditionally Positive and Linear Invariants Preserving Time Integration Schemes
- Issues with positivity-preserving Patankar-type schemes
- A comprehensive theory on generalized BBKS schemes
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