The topology of spaces of phylogenetic trees with symmetry

DOI10.1016/J.DISC.2006.09.023MaRDI QIDQ879400zbMATH OpenOpenAlexFDO

Authors Axel Hultman

Publication date 11 May 2007

Published in Discrete Mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.disc.2006.09.023

zbMATH Keywords

discrete Morse theoryphylogenetic trees

Mathematics Subject Classification ID

Enumerative combinatorics (05A99) Problems related to evolution (92D15) Relations of low-dimensional topology with graph theory (57M15) PL-topology (57Q99)

Recommendations

• Nested set complexes of Dowling lattices and complexes of Dowling trees
• Polyhedral Covers of Tree Space
• Geometry of the space of phylogenetic trees
• A space of phylogenetic networks
• Peeling phylogenetic `oranges'

Cites work

• scientific article; zbMATH DE number 830463 (Why is no real title available?)
• A class of geometric lattices based on finite groups
• Collapsibility of Δ(Π_{𝑛})/𝒮_{𝓃} and some related CW complexes
• Geometry of the space of phylogenetic trees
• Homotopy properties of the poset of nontrivial p-subgroups of a group
• Morse theory for cell complexes
• Nested set complexes of Dowling lattices and complexes of Dowling trees
• On discrete Morse functions and combinatorial decompositions
• The Bergman complex of a matroid and phylogenetic trees

Cited in

(9)

• Phylogenetic analysis and homology
• Exponential formulas for models of complex reflection groups
• Peeling phylogenetic `oranges'
• Nested set complexes of Dowling lattices and complexes of Dowling trees
• The isometry group of phylogenetic tree space is $S_n$
• Generalized Regularity and the Symmetry of Branches of Botanological Networks
• A regular decomposition of the edge-product space of phylogenetic trees
• The edge-product space of phylogenetic trees is not shellable
• Topological properties of phylogenetic trees in evolutionary models

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