Ancestries of a recombining diploid population

DOI10.1007/S00285-015-0886-ZMaRDI QIDQ907129zbMATH OpenOpenAlexWikidataFDO

Authors Bhalchandra D. Thatte, Raazesh Sainudiin, A. Véber

Publication date 2 February 2016

Published in Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00285-015-0886-z

zbMATH Keywords

Chang's pedigreeGriffiths' and Hudson's ancestral recombination graphsKingman's coalescentzygotic/karyotic/cytoplasmic/sub-karyotic ancestral graphs

Mathematics Subject Classification ID

Combinatorial probability (60C05) Discrete-time Markov processes on general state spaces (60J05) Applications of branching processes (60J85) Genetics and epigenetics (92D10) Problems related to evolution (92D15)

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Cites work

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• scientific article; zbMATH DE number 3145626 (Why is no real title available?)
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• scientific article; zbMATH DE number 686998 (Why is no real title available?)
• scientific article; zbMATH DE number 1094276 (Why is no real title available?)
• scientific article; zbMATH DE number 2119076 (Why is no real title available?)
• Inbreeding, pedigree size, and the most recent common ancestor of humanity
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• Recent common ancestors of all present-day individuals
• ReCombinatorics. The algorithmics of ancestral recombination graphs and explicit phylogenetic networks. With contributions from Charles H. Langley, Yun S. Song and Yufeng Wu
• The coalescent
• The existence and abundance of ghost ancestors in biparental populations
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• To what extent does genealogical ancestry imply genetic ancestry?

Cited in

(15)

• Genetic relationship between Kangal, Akbash and other dog populations
• The time to the ancestor along sequences with recombination
• The genealogical tree of a chromosome
• Chromosome painting: how recombination mixes ancestral colors
• Time to the MRCA of a sample in a Wright-Fisher model with variable population size
• The existence and abundance of ghost ancestors in biparental populations
• Single-crossover recombination and ancestral recombination trees
• The largest strongly connected component in the cyclical pedigree model of Wakeley et al.
• The ancestry of genetic segments
• scientific article; zbMATH DE number 176645 (Why is no real title available?)
• scientific article; zbMATH DE number 1094276 (Why is no real title available?)
• Recent common ancestors of all present-day individuals
• Exact simulation of the genealogical tree for a stationary branching population and application to the asymptotics of its total length
• Time Since Common Pedigree Ancestors with Two Progeny per Individual
• To what extent does genealogical ancestry imply genetic ancestry?

Describes a project that uses

Uses Software

• SageMath

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