Hybrid particle swarm optimization and tabu search approach for selecting genes for tumor classification using gene expression data

DOI10.1016/J.COMPBIOLCHEM.2007.10.001MaRDI QIDQ936035zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Qi Shen, Wei Kong, Wei-Min Shi

Publication date 12 August 2008

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2007.10.001

zbMATH Keywords

particle swarm optimizationgene expression datatabu searchgene selection

Mathematics Subject Classification ID

Medical applications (general) (92C50) Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

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Cites work

• Future paths for integer programming and links to artificial intelligence
• Gene selection for cancer classification using support vector machines
• Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models
• Selection bias in gene extraction on the basis of microarray gene-expression data

Cited in

(9)

• Particle swarm optimization: Hybridization perspectives and experimental illustrations
• An enhancement of binary particle swarm optimization based on the proposed constraint and rule for selecting a small subset of informative genes
• Improved binary PSO for feature selection using gene expression data
• A novel weighted support vector machine based on particle swarm optimization for gene selection and tumor classification
• Gene selection via BPSO and backward generation for cancer classification
• A constructive data classification version of the particle swarm optimization algorithm
• Computational optimization for S-type biological systems: cockroach genetic algorithm
• Gene selection via a new hybrid ant colony optimization algorithm for cancer classification in high-dimensional data
• An improved particle swarm optimization algorithm based on centroid and exponential inertia weight

Describes a project that uses

Uses Software

• HykGene

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