REPuter
From MaRDI portal
Cited in
(38)- IDBA
- Improved upper bounds on all maximal -gapped repeats and palindromes
- HAPLO
- MFinder
- Footprinter
- Counter based suffix tree for DNA pattern repeats
- LAGAN
- Distributed suffix trees
- strmat
- MUMMER
- WebLogo
- RepeatMasker
- Mining approximate repeating patterns from sequence data with gap constraints
- TreeBASE
- Poisson Approximation for the Number of Repeats in a Stationary Markov Chain
- Compressed directed acyclic word graph with application in local alignment
- pCLUSTAL
- ParaMEME
- ACME
- MotifClick
- GeneWise
- ParaKMeans
- MODA
- Graemlin
- MultiPhyl
- A simple yet time-optimal and linear-space algorithm for shortest unique substring queries
- PILER
- PhyME
- Warmr
- Arbor3D
- TreeDT
- RadCon
- CloSpan
- Distributed and sequential algorithms for bioinformatics
- Simple and flexible detection of contiguous repeats using a suffix tree
- Data mining in bioinformatics
- Replacing suffix trees with enhanced suffix arrays
- Mining approximate patterns with frequent locally optimal occurrences
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