IDBA
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swMATH43299MaRDI QIDQ1351141FDOQ1351141
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Official website: https://i.cs.hku.hk/~alse/hkubrg/projects/idba/
Source code repository: https://github.com/loneknightpy/idba
Cited In (28)
- A tale of optimizing the space taken by de Bruijn graphs
- BrownieAligner
- Bidirectional Variable-Order de Bruijn Graphs
- Superstring graph: a new approach for genome assembly
- IDBA-Tran
- IDBA-UD
- SOAPdenovo
- ABySS
- Meta-IDBA
- RepeatMasker
- SSAKE
- SPAdes
- T-IDBA
- Velvet
- MEGAHIT
- DARRC
- QSRA
- SHARCGS
- REPuter
- deBGA
- LoRDEC
- MindTheGap
- PE-Assembler
- The complexity of approximate pattern matching on de Bruijn graphs
- BlastGraph
- Counter based suffix tree for DNA pattern repeats
- The contig assembly problem and its algorithmic solutions
- Linking indexing data structures to de Bruijn graphs: construction and update
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