ABySS
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swMATH17343MaRDI QIDQ29203FDOQ29203
Author name not available (Why is that?)
Official website: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2694472/
Cited In (67)
- Estimating sequence similarity from read sets for clustering next-generation sequencing data
- MULKSG: \textit{MUL}tiple \textit{K} \textit{S}imultaneous \textit{G}raph assembly
- OMGS: optical map-based genome scaffolding
- Title not available (Why is that?)
- A tale of optimizing the space taken by de Bruijn graphs
- An external-memory algorithm for string graph construction
- Disentangled long-read de Bruijn graphs via optical maps
- Bioinformatics for high throughput sequencing
- ALLPATHS
- ARACHNE
- On bubble generators in directed graphs
- CAP3
- JIGSAW
- GRASS
- SCARPA
- SOPRA
- SLAM
- GAGE
- Evigan
- IDBA-UD
- SEQuel
- SOAPdenovo
- Apollo
- QUAST
- Artemis
- CEGMA
- ECgene
- SHRiMP
- GeneSplicer
- GBrowse
- GRAIL
- PipMaker
- MAKER-P
- MAKER
- MetaVelvet
- MetaGeneAnnotator
- Meta-IDBA
- RepeatMasker
- PHRAP
- SSAKE
- SPAdes
- RePS
- Velvet
- BFAST
- BEETL
- MEGAHIT
- ALLMAPS
- Bambus 2
- DBG2OLC
- DARRC
- MULKSG
- QSRA
- Phusion
- SHARCGS
- OMGS
- Pilon
- Maligner
- GASSST
- OMBlast
- PBSIM
- PE-Assembler
- IDBA
- Canu
- Comparative gene finding. Models, algorithms and implementation
- ART
- The contig assembly problem and its algorithmic solutions
- CUSHAW suite: parallel and efficient algorithms for NGS read alignment
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