Reconstructing Chromosomal Evolution

DOI10.1137/S0097539701397229MaRDI QIDQ5470748zbMATH OpenFDO

Authors Li-San Wang, Tandy J. Warnow

Publication date 1 June 2006

Published in SIAM Journal on Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1137/S0097539701397229

zbMATH Keywords

distance correctiongenome rearrangementsinversionsMarkov chainNadeau-Taylor modelneighbor joiningphylogeny reconstructiontranspositions

Mathematics Subject Classification ID

Applications of graph theory (05C90) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Problems related to evolution (92D15)

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Cited in

(9)

• The reconstructed evolutionary process with the fossil record
• Exact-IEBP: A New Technique for Estimating Evolutionary Distances between Whole Genomes
• Estimating true evolutionary distances between genomes
• Marker density and estimates of chromosome rearrangement
• Conserved segment statistics and rearrangement inferences in comparative genomics
• Comparative Genomics
• Reconstructing evolution of sequences subject to recombination using parsimony
• TruEst: a better estimator of evolutionary distance under the INFER model
• Multi-break rearrangements and chromosomal evolution

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