Rphylopars

MaRDI QIDQ37855swMATHCRANFDO

Authors Jorn Bruggeman, Eric W. Goolsby, Cecile Ane

Last update 18 January 2024

Copyright license GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier 0.3.9, 0.1.0, 0.1.1, 0.2.1, 0.2.8, 0.2.9, 0.2.11, 0.2.12, 0.3.0, 0.3.2, 0.3.10

Official website https://cran.r-project.org/web/packages/Rphylopars/index.html

Source code repository https://github.com/cran/Rphylopars

Description

Tools for performing phylogenetic comparative methods for datasets with with multiple observations per species (intraspecific variation or measurement error) and/or missing data (Goolsby et al. 2017). Performs ancestral state reconstruction and missing data imputation on the estimated evolutionary model, which can be specified as Brownian Motion, Ornstein-Uhlenbeck, Early-Burst, Pagel's lambda, kappa, or delta, or a star phylogeny.

Cited in

(12)

• Efficient Bayesian inference of general Gaussian models on large phylogenetic trees
• phytools
• GEIGER
• mvMORPH
• diversitree
• PCMBase
• apTreeshape
• logKDE
• ratematrix
• SPLITT
• treeio
• Fast likelihood calculation for multivariate Gaussian phylogenetic models with shifts

This page was built for software: Rphylopars