SPECTRAL CLASSIFICATION OF ARCHAEAL AND BACTERIAL GENOMES

DOI10.1142/S0218339002000561MaRDI QIDQ5468549zbMATH OpenOpenAlexFDO

Authors Su-Long Nyeo, I-Ching Yang, C. H. Wu

Publication date 10 May 2006

Published in Journal of Biological Systems (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/s0218339002000561

zbMATH Keywords

archaeal and bacterial genomesCG contentcoding and noncoding sequencesFourier transformperiodicitiespower spectra

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Recommendations

• Robust classifying of prokaryotic genomes
• Dichotomy of major bacterial phyla inferred from gene arrangement comparisons
• Fuzzy classification of nucleotide sequences and bacterial evolution
• Spectral concepts in genome informational analysis
• Classification studies based on a spectral representation of DNA
• A linguistic approach to classification of bacterial genomes
• Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea
• Heterogeneity of Genome and proteome content in bacteria, archaea, and eukaryotes
• Comparative genomics via wavelet analysis for closely related bacteria

Cited in

(4)

• The mystery of two straight lines in bacterial genome statistics
• Heterogeneity of Genome and proteome content in bacteria, archaea, and eukaryotes
• Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea
• A multirate DSP structure for the identification of protein-coding regions

This page was built for publication: SPECTRAL CLASSIFICATION OF ARCHAEAL AND BACTERIAL GENOMES

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5468549)