MUMMER
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Software:29117
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Related Items (29)
Improved upper bounds on all maximal \(\alpha\)-gapped repeats and palindromes ⋮ A fast algorithm for computing a longest common increasing subsequence ⋮ A linear space algorithm for computing a longest common increasing subsequence ⋮ On the longest increasing subsequence of a circular list ⋮ DNA paired fragment assembly using graph theory ⋮ Replacing suffix trees with enhanced suffix arrays ⋮ Space-time trade-offs for finding shortest unique substrings and maximal unique matches ⋮ Forest alignment with affine gaps and anchors, applied in RNA structure comparison ⋮ PSIST: a scalable approach to indexing protein structures using suffix trees ⋮ Algorithms and Computation ⋮ Comparison of alignment free string distances for complete genome phylogeny ⋮ Fast computation of a longest increasing subsequence and application ⋮ A divide and conquer approach and a work-optimal parallel algorithm for the LIS problem ⋮ Computing a longest common almost-increasing subsequence of two sequences ⋮ Comparing bacterial genomes from linear orders of patterns ⋮ Bioinformatics. Volume I. Data, sequence analysis, and evolution ⋮ Improvised divide and conquer approach for the LIS problem ⋮ Finding longest increasing and common subsequences in streaming data ⋮ GAME: A simple and efficient whole genome alignment method using maximal exact match filtering ⋮ Longest increasing subsequence under persistent comparison errors ⋮ Efficient algorithms for finding a longest common increasing subsequence ⋮ A Lagrangian relaxation approach for the multiple sequence alignment problem ⋮ A diagonal-based algorithm for the longest common increasing subsequence problem ⋮ The longest almost-increasing subsequence ⋮ Space efficient linear time construction of suffix arrays ⋮ Distributed suffix trees ⋮ Chaining algorithms for multiple genome comparison ⋮ A branch-and-cut algorithm for multiple sequence alignment ⋮ Enumeration of maximal common subsequences between two strings
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